org.biopax.paxtools.proxy.level2
Class proteinProxy

java.lang.Object
  org.biopax.paxtools.proxy.level2.BioPAXElementProxy
      org.biopax.paxtools.proxy.level2.InteractionParticipantProxy
          org.biopax.paxtools.proxy.level2.entityProxy
              org.biopax.paxtools.proxy.level2.physicalEntityProxy
                  org.biopax.paxtools.proxy.level2.sequenceEntityProxy
                      org.biopax.paxtools.proxy.level2.proteinProxy

All Implemented Interfaces:

java.io.Serializable, BioPAXElement, entity, InteractionParticipant, physicalEntity, protein, sequenceEntity, XReferrable

@Indexed(index="paxtools")
public class proteinProxy
extends sequenceEntityProxy
implements protein, java.io.Serializable

Proxy for protein

See Also:

Serialized Form

Field Summary

Fields inherited from class org.biopax.paxtools.proxy.level2.BioPAXElementProxy

SEARCH_FIELD_AVAILABILITY, SEARCH_FIELD_COMMENT, SEARCH_FIELD_EC_NUMBER, SEARCH_FIELD_KEYWORD, SEARCH_FIELD_NAME, SEARCH_FIELD_SEQUENCE, SEARCH_FIELD_SYNONYMS, SEARCH_FIELD_TERM, SEARCH_FIELD_XREF_DB, SEARCH_FIELD_XREF_ID, SEARCH_INDEX_NAME

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Constructor Summary

proteinProxy()

Method Summary

Methods inherited from class org.biopax.paxtools.proxy.level2.sequenceEntityProxy

getORGANISM, getSEQUENCE, setORGANISM, setSEQUENCE

Methods inherited from class org.biopax.paxtools.proxy.level2.physicalEntityProxy

isPHYSICAL_ENTITYof

Methods inherited from class org.biopax.paxtools.proxy.level2.entityProxy

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, addXREF, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, getXREF, isPARTICIPANTSof, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, removeXREF, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS, setXREF

Methods inherited from class org.biopax.paxtools.proxy.level2.BioPAXElementProxy

addCOMMENT, doubleSetToStringSet, doubleToString, equals, equivalenceCode, floatToString, getCOMMENT, getModelInterface, getProxyId, getRDFId, hashCode, isEquivalent, removeCOMMENT, setCOMMENT, setProxyId, setRDFId, stringSetToDoubleSet, stringToDouble, stringToFloat

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.biopax.paxtools.model.level2.sequenceEntity

getORGANISM, getSEQUENCE, setORGANISM, setSEQUENCE

Methods inherited from interface org.biopax.paxtools.model.level2.physicalEntity

isPHYSICAL_ENTITYof

Methods inherited from interface org.biopax.paxtools.model.level2.entity

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.InteractionParticipant

isPARTICIPANTSof

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Constructor Detail

proteinProxy

public proteinProxy()