org.biopax.paxtools.proxy.level2
Class interactionProxy

java.lang.Object
  org.biopax.paxtools.proxy.level2.BioPAXElementProxy
      org.biopax.paxtools.proxy.level2.InteractionParticipantProxy
          org.biopax.paxtools.proxy.level2.entityProxy
              org.biopax.paxtools.proxy.level2.processProxy
                  org.biopax.paxtools.proxy.level2.interactionProxy

All Implemented Interfaces:

java.io.Serializable, BioPAXElement, entity, interaction, InteractionParticipant, pathwayComponent, process, XReferrable

Direct Known Subclasses:

physicalInteractionProxy

@Indexed(index="paxtools")
public class interactionProxy
extends processProxy
implements interaction, java.io.Serializable

Proxy for interaction

See Also:

Serialized Form

Field Summary

Fields inherited from class org.biopax.paxtools.proxy.level2.BioPAXElementProxy

SEARCH_FIELD_AVAILABILITY, SEARCH_FIELD_COMMENT, SEARCH_FIELD_EC_NUMBER, SEARCH_FIELD_KEYWORD, SEARCH_FIELD_NAME, SEARCH_FIELD_SEQUENCE, SEARCH_FIELD_SYNONYMS, SEARCH_FIELD_TERM, SEARCH_FIELD_XREF_DB, SEARCH_FIELD_XREF_ID, SEARCH_INDEX_NAME

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Constructor Summary

interactionProxy()

Method Summary

void	addPARTICIPANTS(InteractionParticipant aParticipant)
protected void	call_setPARTICIPANTS_x(java.util.Set<InteractionParticipant> PARTICIPANTS)
protected java.util.Set<InteractionParticipant>	getPARTICIPANTS_x()
java.util.Set<InteractionParticipant>	getPARTICIPANTS()
void	removePARTICIPANTS(InteractionParticipant aParticipant)
protected void	setPARTICIPANTS_x(java.util.Set<InteractionParticipant> PARTICIPANTS)
void	setPARTICIPANTS(java.util.Set<InteractionParticipant> PARTICIPANTS)

Methods inherited from class org.biopax.paxtools.proxy.level2.processProxy

addEVIDENCE, getEVIDENCE, isCONTROLLEDOf, isPATHWAY_COMPONENTSof, isSTEP_INTERACTIONSOf, removeEVIDENCE, setEVIDENCE

Methods inherited from class org.biopax.paxtools.proxy.level2.entityProxy

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, addXREF, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, getXREF, isPARTICIPANTSof, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, removeXREF, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS, setXREF

Methods inherited from class org.biopax.paxtools.proxy.level2.BioPAXElementProxy

addCOMMENT, doubleSetToStringSet, doubleToString, equals, equivalenceCode, floatToString, getCOMMENT, getModelInterface, getProxyId, getRDFId, hashCode, isEquivalent, removeCOMMENT, setCOMMENT, setProxyId, setRDFId, stringSetToDoubleSet, stringToDouble, stringToFloat

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.biopax.paxtools.model.level2.process

addEVIDENCE, getEVIDENCE, isCONTROLLEDOf, isSTEP_INTERACTIONSOf, removeEVIDENCE, setEVIDENCE

Methods inherited from interface org.biopax.paxtools.model.level2.entity

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.InteractionParticipant

isPARTICIPANTSof

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.pathwayComponent

isPATHWAY_COMPONENTSof

Constructor Detail

interactionProxy

public interactionProxy()

Method Detail

getPARTICIPANTS

public java.util.Set<InteractionParticipant> getPARTICIPANTS()

Specified by:

getPARTICIPANTS in interface interaction

setPARTICIPANTS

public void setPARTICIPANTS(java.util.Set<InteractionParticipant> PARTICIPANTS)

Specified by:

setPARTICIPANTS in interface interaction

getPARTICIPANTS_x

protected java.util.Set<InteractionParticipant> getPARTICIPANTS_x()

setPARTICIPANTS_x

protected void setPARTICIPANTS_x(java.util.Set<InteractionParticipant> PARTICIPANTS)

call_setPARTICIPANTS_x

protected void call_setPARTICIPANTS_x(java.util.Set<InteractionParticipant> PARTICIPANTS)

addPARTICIPANTS

public void addPARTICIPANTS(InteractionParticipant aParticipant)

Specified by:

addPARTICIPANTS in interface interaction

removePARTICIPANTS

public void removePARTICIPANTS(InteractionParticipant aParticipant)

Specified by:

removePARTICIPANTS in interface interaction