org.biopax.paxtools.model.level2
Interface conversion

All Superinterfaces:

BioPAXElement, entity, interaction, InteractionParticipant, pathwayComponent, physicalInteraction, process, XReferrable

All Known Subinterfaces:

biochemicalReaction, complexAssembly, transport, transportWithBiochemicalReaction

All Known Implementing Classes:

biochemicalReactionImpl, biochemicalReactionProxy, complexAssemblyImpl, complexAssemblyProxy, conversionImpl, conversionProxy, transportImpl, transportProxy, transportWithBiochemicalReactionImpl, transportWithBiochemicalReactionProxy

public interface conversion
extends physicalInteraction

Field Summary

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Method Summary

void	addLEFT(physicalEntityParticipant LEFT)
void	addRIGHT(physicalEntityParticipant RIGHT)
java.util.Set<physicalEntityParticipant>	getLEFT()
java.util.Set<physicalEntityParticipant>	getRIGHT()
SpontaneousType	getSPONTANEOUS()
void	removeLEFT(physicalEntityParticipant LEFT)
void	removeRIGHT(physicalEntityParticipant RIGHT)
void	setLEFT(java.util.Set<physicalEntityParticipant> LEFT)
void	setRIGHT(java.util.Set<physicalEntityParticipant> RIGHT)
void	setSPONTANEOUS(SpontaneousType SPONTANEOUS)

Methods inherited from interface org.biopax.paxtools.model.level2.physicalInteraction

addINTERACTION_TYPE, getINTERACTION_TYPE, removeINTERACTION_TYPE, setINTERACTION_TYPE

Methods inherited from interface org.biopax.paxtools.model.level2.interaction

addPARTICIPANTS, getPARTICIPANTS, removePARTICIPANTS, setPARTICIPANTS

Methods inherited from interface org.biopax.paxtools.model.level2.process

addEVIDENCE, getEVIDENCE, isCONTROLLEDOf, isSTEP_INTERACTIONSOf, removeEVIDENCE, setEVIDENCE

Methods inherited from interface org.biopax.paxtools.model.level2.entity

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.InteractionParticipant

isPARTICIPANTSof

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.pathwayComponent

isPATHWAY_COMPONENTSof

Method Detail

getLEFT

java.util.Set<physicalEntityParticipant> getLEFT()

getRIGHT

java.util.Set<physicalEntityParticipant> getRIGHT()

getSPONTANEOUS

SpontaneousType getSPONTANEOUS()

addLEFT

void addLEFT(physicalEntityParticipant LEFT)

addRIGHT

void addRIGHT(physicalEntityParticipant RIGHT)

removeLEFT

void removeLEFT(physicalEntityParticipant LEFT)

removeRIGHT

void removeRIGHT(physicalEntityParticipant RIGHT)

setLEFT

void setLEFT(java.util.Set<physicalEntityParticipant> LEFT)

setRIGHT

void setRIGHT(java.util.Set<physicalEntityParticipant> RIGHT)

setSPONTANEOUS

void setSPONTANEOUS(SpontaneousType SPONTANEOUS)