org.biopax.paxtools.impl.level2
Class processImpl

java.lang.Object
  org.biopax.paxtools.impl.level2.bioPAXElementImpl
      org.biopax.paxtools.impl.level2.entityImpl
          org.biopax.paxtools.impl.level2.processImpl

All Implemented Interfaces:

BioPAXElement, entity, InteractionParticipant, pathwayComponent, process, XReferrable

Direct Known Subclasses:

interactionAdapter, pathwayImpl

public abstract class processImpl
extends entityImpl
implements process

Field Summary

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Constructor Summary

processImpl()

Method Summary

void	addCONTROLLEDof(control aControl)
void	addEVIDENCE(evidence EVIDENCE)
void	addSTEP_INTERACTIONSOf(pathwayStep aPathwayStep)
java.util.Set<evidence>	getEVIDENCE()
java.util.Set<control>	isCONTROLLEDOf()
java.util.Set<pathway>	isPATHWAY_COMPONENTSof()
java.util.Set<pathwayStep>	isSTEP_INTERACTIONSOf()
void	removeEVIDENCE(evidence EVIDENCE)
void	setEVIDENCE(java.util.Set<evidence> EVIDENCE)

Methods inherited from class org.biopax.paxtools.impl.level2.entityImpl

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, addXREF, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, getXREF, isPARTICIPANTSof, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, removeXREF, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS, setXREF

Methods inherited from class org.biopax.paxtools.impl.level2.bioPAXElementImpl

addCOMMENT, equals, getCOMMENT, getRDFId, hashCode, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.biopax.paxtools.model.level2.entity

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.InteractionParticipant

isPARTICIPANTSof

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getModelInterface, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Constructor Detail

processImpl

public processImpl()

Method Detail

isPATHWAY_COMPONENTSof

public java.util.Set<pathway> isPATHWAY_COMPONENTSof()

Specified by:

isPATHWAY_COMPONENTSof in interface pathwayComponent

getEVIDENCE

public java.util.Set<evidence> getEVIDENCE()

Specified by:

getEVIDENCE in interface process

setEVIDENCE

public void setEVIDENCE(java.util.Set<evidence> EVIDENCE)

Specified by:

setEVIDENCE in interface process

addEVIDENCE

public void addEVIDENCE(evidence EVIDENCE)

Specified by:

addEVIDENCE in interface process

removeEVIDENCE

public void removeEVIDENCE(evidence EVIDENCE)

Specified by:

removeEVIDENCE in interface process

isSTEP_INTERACTIONSOf

public java.util.Set<pathwayStep> isSTEP_INTERACTIONSOf()

Specified by:

isSTEP_INTERACTIONSOf in interface process

isCONTROLLEDOf

public java.util.Set<control> isCONTROLLEDOf()

Specified by:

isCONTROLLEDOf in interface process

addCONTROLLEDof

public void addCONTROLLEDof(control aControl)

addSTEP_INTERACTIONSOf

public void addSTEP_INTERACTIONSOf(pathwayStep aPathwayStep)