org.biopax.paxtools.impl.level2
Class modulationImpl

java.lang.Object
  org.biopax.paxtools.impl.level2.bioPAXElementImpl
      org.biopax.paxtools.impl.level2.entityImpl
          org.biopax.paxtools.impl.level2.processImpl
              org.biopax.paxtools.impl.level2.interactionAdapter
                  org.biopax.paxtools.impl.level2.physicalInteractionAdapter
                      org.biopax.paxtools.impl.level2.controlImpl
                          org.biopax.paxtools.impl.level2.modulationImpl

All Implemented Interfaces:

BioPAXElement, control, entity, interaction, InteractionParticipant, modulation, pathwayComponent, physicalInteraction, process, XReferrable

public class modulationImpl
extends controlImpl
implements modulation

Field Summary

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Constructor Summary

modulationImpl()

Method Summary

protected void	checkCONTROLLED(entity CONTROLLED)
protected boolean	checkCONTROLLED(process controlled)
java.lang.Class	getModelInterface()

Methods inherited from class org.biopax.paxtools.impl.level2.controlImpl

addCONTROLLED, addCONTROLLER, addPARTICIPANTS, getCONTROL_TYPE, getCONTROLLED, getCONTROLLER, isEquivalent, removeCONTROLLED, removeCONTROLLER, removePARTICIPANTS, setCONTROL_TYPE, setCONTROLLED, setCONTROLLER, setPARTICIPANTS

Methods inherited from class org.biopax.paxtools.impl.level2.physicalInteractionAdapter

addINTERACTION_TYPE, getINTERACTION_TYPE, removeINTERACTION_TYPE, setINTERACTION_TYPE

Methods inherited from class org.biopax.paxtools.impl.level2.interactionAdapter

compareParticipantSets, equivalenceCode, getPARTICIPANTS, setParticipantInverse, updatePARTICIPANTS

Methods inherited from class org.biopax.paxtools.impl.level2.processImpl

addCONTROLLEDof, addEVIDENCE, addSTEP_INTERACTIONSOf, getEVIDENCE, isCONTROLLEDOf, isPATHWAY_COMPONENTSof, isSTEP_INTERACTIONSOf, removeEVIDENCE, setEVIDENCE

Methods inherited from class org.biopax.paxtools.impl.level2.entityImpl

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, addXREF, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, getXREF, isPARTICIPANTSof, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, removeXREF, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS, setXREF

Methods inherited from class org.biopax.paxtools.impl.level2.bioPAXElementImpl

addCOMMENT, equals, getCOMMENT, getRDFId, hashCode, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.biopax.paxtools.model.level2.control

addCONTROLLED, addCONTROLLER, getCONTROL_TYPE, getCONTROLLED, getCONTROLLER, removeCONTROLLED, removeCONTROLLER, setCONTROL_TYPE, setCONTROLLED, setCONTROLLER

Methods inherited from interface org.biopax.paxtools.model.level2.physicalInteraction

addINTERACTION_TYPE, getINTERACTION_TYPE, removeINTERACTION_TYPE, setINTERACTION_TYPE

Methods inherited from interface org.biopax.paxtools.model.level2.interaction

addPARTICIPANTS, getPARTICIPANTS, removePARTICIPANTS, setPARTICIPANTS

Methods inherited from interface org.biopax.paxtools.model.level2.process

addEVIDENCE, getEVIDENCE, isCONTROLLEDOf, isSTEP_INTERACTIONSOf, removeEVIDENCE, setEVIDENCE

Methods inherited from interface org.biopax.paxtools.model.level2.entity

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.InteractionParticipant

isPARTICIPANTSof

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, equivalenceCode, getCOMMENT, getRDFId, isEquivalent, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.pathwayComponent

isPATHWAY_COMPONENTSof

Constructor Detail

modulationImpl

public modulationImpl()

Method Detail

getModelInterface

public java.lang.Class getModelInterface()

Specified by:

getModelInterface in interface BioPAXElement

Overrides:

getModelInterface in class controlImpl

checkCONTROLLED

protected void checkCONTROLLED(entity CONTROLLED)

checkCONTROLLED

protected boolean checkCONTROLLED(process controlled)

Overrides:

checkCONTROLLED in class controlImpl