org.biopax.paxtools.impl.level2
Class evidenceImpl

java.lang.Object
  org.biopax.paxtools.impl.level2.bioPAXElementImpl
      org.biopax.paxtools.impl.level2.evidenceImpl

All Implemented Interfaces:

BioPAXElement, evidence, utilityClass, XReferrable

public class evidenceImpl
extends bioPAXElementImpl
implements evidence

Field Summary

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Fields inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Constructor Summary

evidenceImpl()

Method Summary

void	addCONFIDENCE(confidence CONFIDENCE)
void	addEVIDENCE_CODE(openControlledVocabulary EVIDENCE_CODE)
void	addEXPERIMENTAL_FORM(experimentalForm EXPERIMENTAL_FORM)
void	addXREF(xref XREF)
int	equivalenceCode()
java.util.Set<confidence>	getCONFIDENCE()
java.util.Set<openControlledVocabulary>	getEVIDENCE_CODE()
java.util.Set<experimentalForm>	getEXPERIMENTAL_FORM()
java.lang.Class	getModelInterface()
java.util.Set<xref>	getXREF()
boolean	isEquivalent(BioPAXElement element)
void	removeCONFIDENCE(confidence CONFIDENCE)
void	removeEVIDENCE_CODE(openControlledVocabulary EVIDENCE_CODE)
void	removeEXPERIMENTAL_FORM(experimentalForm EXPERIMENTAL_FORM)
void	removeXREF(xref XREF)
void	setCONFIDENCE(java.util.Set<confidence> CONFIDENCE)
void	setEVIDENCE_CODE(java.util.Set<openControlledVocabulary> EVIDENCE_CODE)
void	setEXPERIMENTAL_FORM(java.util.Set<experimentalForm> EXPERIMENTAL_FORM)
void	setXREF(java.util.Set<xref> XREF)

Methods inherited from class org.biopax.paxtools.impl.level2.bioPAXElementImpl

addCOMMENT, equals, getCOMMENT, getRDFId, hashCode, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, getCOMMENT, getRDFId, removeCOMMENT, setCOMMENT, setRDFId

Methods inherited from interface org.biopax.paxtools.model.level2.BioPAXElement

addCOMMENT, getCOMMENT, getRDFId, removeCOMMENT, setCOMMENT, setRDFId

Constructor Detail

evidenceImpl

public evidenceImpl()

Method Detail

isEquivalent

public boolean isEquivalent(BioPAXElement element)

Specified by:

isEquivalent in interface BioPAXElement

equivalenceCode

public int equivalenceCode()

Specified by:

equivalenceCode in interface BioPAXElement

getModelInterface

public java.lang.Class getModelInterface()

Specified by:

getModelInterface in interface BioPAXElement

getXREF

public java.util.Set<xref> getXREF()

Specified by:

getXREF in interface XReferrable

setXREF

public void setXREF(java.util.Set<xref> XREF)

Specified by:

setXREF in interface XReferrable

addXREF

public void addXREF(xref XREF)

Specified by:

addXREF in interface XReferrable

removeXREF

public void removeXREF(xref XREF)

Specified by:

removeXREF in interface XReferrable

getEXPERIMENTAL_FORM

public java.util.Set<experimentalForm> getEXPERIMENTAL_FORM()

Specified by:

getEXPERIMENTAL_FORM in interface evidence

setEXPERIMENTAL_FORM

public void setEXPERIMENTAL_FORM(java.util.Set<experimentalForm> EXPERIMENTAL_FORM)

Specified by:

setEXPERIMENTAL_FORM in interface evidence

addEXPERIMENTAL_FORM

public void addEXPERIMENTAL_FORM(experimentalForm EXPERIMENTAL_FORM)

Specified by:

addEXPERIMENTAL_FORM in interface evidence

removeEXPERIMENTAL_FORM

public void removeEXPERIMENTAL_FORM(experimentalForm EXPERIMENTAL_FORM)

Specified by:

removeEXPERIMENTAL_FORM in interface evidence

getCONFIDENCE

public java.util.Set<confidence> getCONFIDENCE()

Specified by:

getCONFIDENCE in interface evidence

setCONFIDENCE

public void setCONFIDENCE(java.util.Set<confidence> CONFIDENCE)

Specified by:

setCONFIDENCE in interface evidence

addCONFIDENCE

public void addCONFIDENCE(confidence CONFIDENCE)

Specified by:

addCONFIDENCE in interface evidence

removeCONFIDENCE

public void removeCONFIDENCE(confidence CONFIDENCE)

Specified by:

removeCONFIDENCE in interface evidence

getEVIDENCE_CODE

public java.util.Set<openControlledVocabulary> getEVIDENCE_CODE()

Specified by:

getEVIDENCE_CODE in interface evidence

setEVIDENCE_CODE

public void setEVIDENCE_CODE(java.util.Set<openControlledVocabulary> EVIDENCE_CODE)

Specified by:

setEVIDENCE_CODE in interface evidence

addEVIDENCE_CODE

public void addEVIDENCE_CODE(openControlledVocabulary EVIDENCE_CODE)

Specified by:

addEVIDENCE_CODE in interface evidence

removeEVIDENCE_CODE

public void removeEVIDENCE_CODE(openControlledVocabulary EVIDENCE_CODE)

Specified by:

removeEVIDENCE_CODE in interface evidence