http://www.inoh.org/inohblog/main/ Integrating Network Objects with Hierarchies en_us 2008-02-04T18:48:46+09:00 http://www.inoh.org/inohblog/main/2008/02/inoh_client_mac_osx_support.html INOH client 2.0.2 does not officially support Mac OSX because some of its features require Java 6, which has not been made available from Apple yet. But if you only do browsing then you can use the linux version on... Software KenFukuda 2008-02-04T18:48:46+09:00 http://www.inoh.org/inohblog/main/2007/12/inoh_client_application_new_ve.html Our new INOH Client is now available. Currently only Windows and Linux are supported. Mac OSX will be supported as soon as Apple releases Java 6 for Leopard. You can download the application from here. This version is a major... KenFukuda 2007-12-03T17:22:21+09:00 http://www.inoh.org/inohblog/main/2007/11/inoh_release_20_has_been_relea.html The data files are available from our download site. ====================== newly curated pathways ====================== EPO signaling pathway(JAK2 STAT1 STAT3 STAT5) Fas signaling pathway GPCR Adenosine A2A receptor signaling pathway TNFR1 signaling pathway ================= updated pathways ================= BMP2 signaling(through TAK1) BMP2... PathwayData KenFukuda 2007-11-30T16:07:44+09:00 http://www.inoh.org/inohblog/main/2007/10/paxtools_level2_persistency_la.html Paxtools persistency layer for BioPAX Level 2 specification is available from the BioPAX sourceforge CVS. Paxtools is a Domain Object Model(DOM) for BioPAX, providing software tools such as editors, exporters, importers, visualization tools and analysis algorithms with an API for... Software KenFukuda 2007-10-25T10:47:52+09:00 http://www.inoh.org/inohblog/main/2007/10/moleculerole_ontology_ver222.html The latest MoleculeRole Ontology is Ver2.22 MoleculeRole Ontology is an ontology for proteins. You can download it from the OBO site and from our download page. Statistics ========== All entries 8821 Chemicals 592 Proteins 8228 Obsoletes 25 UniProt ACs 5572... OntologyData SatokoYamamoto 2007-10-03T17:44:41+09:00 http://www.inoh.org/inohblog/main/2007/10/event_ontology_ver162.html The latest Event Ontology is Ver.1.62 Event Ontology is an ontology of pathways. It classifies pathways, sub-pathways and other biological phenomena to form a DAG structure. You can download it from the OBO site and from our download page. Statistics... OntologyData NorikoSakai 2007-10-03T17:33:51+09:00 http://www.inoh.org/inohblog/main/2007/03/inoh_release_15_has_been_relea.html Additional curation and bug fixes to BioPAX level2 export has been done. The data is available from our download site. ========== Statistics ========== BioPAX Level2 instances: control 105 catalysis 451 conversion 133 biochemicalReaction 469 complexAssembly 688 transport 124 physicalEntityParticipant 2479... PathwayData KenFukuda 2007-03-31T11:47:45+09:00 http://www.inoh.org/inohblog/main/2007/03/moleculerole_ontology_ver221.html The latest MoleculeRole Ontology is Ver2.21 MoleculeRole Ontology is an ontology for proteins. You can download it from the OBO site and from our download page. Statistics ========== All entries 8649 Chemicals 592 Proteins 8056 Obsoletes 25 UniProt ACs 5465... OntologyData SatokoYamamoto 2007-03-29T11:35:39+09:00 http://www.inoh.org/inohblog/main/2007/03/event_ontology_ver161.html The latest Event Ontology is Ver.1.61 Event Ontology is an ontology of pathways. It classifies pathways, sub-pathways and other biological phenomena to form a DAG structure. You can download it from the OBO site and from our download page. Statistics... OntologyData NorikoSakai 2007-03-28T19:11:36+09:00 http://www.inoh.org/inohblog/main/2007/01/system_maintenance_feb_3_900_a.html INOH will be down from Feb 3 to Feb 5. Our host server at the Human Genome Center (HGC) will be shutdown due to scheduled system maintenance. ------------------------------------------------------------------------- NOTICE Due to the system maintenance and the electricity supply facilities maintenance... Information KenFukuda 2007-01-23T14:56:00+09:00 http://www.inoh.org/inohblog/main/2006/11/moleculerole_ontology_ver220.html The latest MoleculeRole Ontology is Ver2.20 MoleculeRole Ontology is an ontology for proteins. You can download it from the OBO site and from our download page. Statistics ========== All entries 8457 Chemicals 592 Proteins 7864 Obsoletes 23 UniProt ACs 5286... OntologyData SatokoYamamoto 2006-11-01T16:59:44+09:00 http://www.inoh.org/inohblog/main/2006/09/inoh_biopax_level2_release_upd.html INOH BioPAX Level2 release has been updated and is available here. The update includes data error correction and new XREFs to various resources such as UniProt, IPR, KEGG, Reactome, GO, ChEBI.... PathwayData KenFukuda 2006-09-28T22:02:04+09:00 http://www.inoh.org/inohblog/main/2006/08/event_ontology_ver160_1.html The latest Event Ontology is Ver.1.60 Event Ontology is an ontology of pathways. It classifies pathways, sub-pathways and other biological phenomena to form a DAG structure. You can download it from the OBO site and from our download page.... OntologyData KenFukuda 2006-08-23T10:19:37+09:00 http://www.inoh.org/inohblog/main/2006/08/inoh_biopax_level2_release.html All INOH pathway diagram files are now available in BioPAX Level2 format. Visit Download page and get each file separately or as a single archive.... PathwayData KenFukuda 2006-08-10T17:12:55+09:00 http://www.inoh.org/inohblog/main/2006/05/inoh_client_ver106.html The latest INOH Client is Ver1.0.6 INOH Client Tool is a Java Application to edit and search our pathway data. User's manual Download Release Notes ====================== Version 1.0.6 bug fixes in "Type" edit slot of "SequenceFeature" Version 1.0.5 mouse-wheel support:... Software HiromiNakamura 2006-05-12T16:35:20+09:00