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June 01, 2010
Event Ontology Ver.1.70
The latest Event Ontology is Ver.1.70
Event Ontology is an ontology of pathways.
It classifies pathways, sub-pathways and other biological phenomena to form a DAG structure.
You can browse or search this ontology at INOH Ontology Viewer and download it from the OBO site and from our download page.
Statistics
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All entries 3756
Obsoletes 149
definition 653
GO IDs 516
KEGG IDs 825
Reactome IDs 110
PSI-MI IDs 70
Event Ontology Release Notes
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Version: 1.70 (28th Apr, 2010)
Event Ontology is an ontology that organizes the concepts and terms of pathway objects such as sub-pathways, biological processes and experimental environments appearing in the cellular pathway (e.g. signal transductions, disease pathways, metabolic pathways, etc.) The concepts in the Event Ontology were manually extracted from scientific articles and text books. Each concept has a link to Gene Ontology if possible.
Changes from version 1.62
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1. add the terms related to IGF signaling pathway, EGF signaling pathway, FGF signaling pathway, insulin signaling pathway, Hedgehog signaling pathway and metabolic pathway.
2. add the location where events take place to the terms for "moleculer interaction".
3. add three new relationship types --regulates, negatively_regulates and positively_regulates.
4. remove the terms for the annotation of events whose biological process is unknown.
5. etc.
More information about Event Ontology
---------------------
Tatsuya Kushida, Toshihisa Takagi and Ken Ichiro Fukuda, Event Ontology: A Pathway-Centric Ontology for Biological Processes. Pacific Symposium on Biocomputing 11:152-163(2006).
Statistics
==========
All entries 3756
Obsoletes 149
definition 653
GO IDs 516
KEGG IDs 825
Reactome IDs 110
PSI-MI IDs 70
Posted by NorikoSakai : June 1, 2010 03:22 PM
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