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February 08, 2006

Event Ontology Ver.1.59

The latest Event Ontology is Ver.1.59

Event Ontology is an ontology of pathways.
It classifies pathways, sub-pathways and other biological phenomena to form a DAG structure.

You can download it from the OBO site and from our download page.

Statistics
==========
All entries 2665
Obsoletes 22
definition 291

GO IDs 253
KEGG PATHWAY IDs 173
Reactome IDs 110
PSI-MI IDs 51

Event Ontology Release Notes
=====================
Version: 1.59 (8th Feb. 2006)

Event Ontology is an ontology that organizes the concepts and terms of pathway objects such as sub-pathways, biological processes and experimental environments appearing in the cellular pathway (e.g. signal transductions, disease pathways, metabolic pathways, etc.) The concepts in the Event Ontology were manually extracted from scientific articles and text books. Each concept has a link to Gene Ontology if possible.

Changes from version 1.57
=====================
[Added terms]

1. terms related to molecular interaction (e.g., IEV_0002674:Formylation)
2. terms related to genetic interaction (e.g., IEV_0002683:suppression)
3. terms related to Nervous system development (e.g., IEV_0002707:Neural tube formation)
4. subpathways related to TPO signaling pathway (e.g., IEV_0002658:Binding of TPO receptor and STAT3)
5. etc.

More information about Event Ontology
---------------------
Tatsuya Kushida, Toshihisa Takagi and Ken Ichiro Fukuda, Event ontology: a pathway-centric ontology for biological processes, Proc. Pacific Symposium on Biocomputing, 2006. (in press)


Statistics
==========
All entries 2665
Obsoletes 22
definition 291

GO IDs 253
KEGG PATHWAY IDs 173
Reactome IDs 110
PSI-MI IDs 51

Posted by NorikoSakai : February 8, 2006 04:05 PM

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